Reza Sameni Publications List

[1] M. Fatemi and R. Sameni, “An Online Subspace Denoising Algorithm for Maternal ECG Removal from Fetal ECG Signals,” Iranian Journal of Science and Technology, Transactions of Electrical Engineering, vol. 2017, pp. 1-15, April 2017. [ bib | DOI ]
[2] H. Hassani Saadi, R. Sameni, and A. Zollanvari, “Interpretive time-frequency analysis of genomic sequences,” BMC Bioinformatics, vol. 18, no. 4, p. 154, 2017. [Online]. Available: http://dx.doi.org/10.1186/s12859-017-1524-0bib | DOI | http ]
[3] R. Sameni, “Online filtering using piecewise smoothness priors: Application to normal and abnormal electrocardiogram denoising,” Signal Processing, vol. 133, pp. 52 - 63, 2017, preprint Available at: https://hal.archives-ouvertes.fr/hal-01352281. [ bib | DOI ]
[4] E. Seraj and R. Sameni, “Robust electroencephalogram phase estimation with applications in brain-computer interface systems,” Physiological Measurement, vol. 38, no. 3, p. 501, 2017. [Online]. Available: http://stacks.iop.org/0967-3334/38/i=3/a=501bib | http ]
[5] H. Biglari and R. Sameni, “Fetal motion estimation from noninvasive cardiac signal recordings,” Physiological Measurement, vol. 37, no. 11, pp. 2003-2023, November 2016. [Online]. Available: http://stacks.iop.org/0967-3334/37/i=11/a=2003bib | http ]
[6] --, “Spatio-Temporal Source Separation using Temporal Priors with Parameterized Uncertainties,” Oct. 2016, working paper or preprint. [Online]. Available: https://hal.archives-ouvertes.fr/hal-01382035bib | http ]
[7] J. Behar, T. Zhu, J. Oster, A. Niksch, D. Y. Mah, T. Chun, J. Greenberg, C. Tanner, J. Harrop, R. Sameni, J. Ward, A. J. Wolfberg, and G. D. Clifford, “Evaluation of the fetal QT interval using non-invasive fetal ECG technology,” Physiological Measurement, vol. 37, no. 9, pp. 1392-1403, September 2016. [Online]. Available: http://stacks.iop.org/0967-3334/37/i=9/a=1392bib | http ]
[8] E. Nikahd, P. Behnam, and R. Sameni, “High-speed hardware implementation of fixed and runtime variable window length 1-d median filters,” IEEE Transactions on Circuits and Systems II: Express Briefs, vol. 63, no. 5, pp. 478-482, 2016. [ bib ]
[9] R. Sameni and E. Seraj, “A Robust Statistical Framework for Instantaneous Electroencephalogram Phase and Frequency Analysis,” Elsevier Neuro-Image, Aug 2016, under Review. [Online]. Available: https://hal.archives-ouvertes.fr/hal-01355465bib | http ]
[10] --, “Towards Distributed Component Analysis,” Oct. 2015, working paper or preprint. [Online]. Available: https://hal.archives-ouvertes.fr/hal-01382076bib | http ]
[11] F. Razavipour and R. Sameni, “A Study of Event Related Potential Frequency Domain Coherencyusing Multichannel Electroencephalogram Subspace Analysis,” Journal of Neuroscience Methods, vol. 249, pp. 22-28, July 2015. [ bib | DOI ]
[12] H. Narimani and R. Sameni, “Electrocardiogram denoising using h-infinity filters,” in Electrical Engineering (ICEE), 2015 23rd Iranian Conference on, May 2015. [ bib ]
[13] M. Samieinasab and R. Sameni, “Fetal phonocardiogram extraction using single channel blind source separation,” in Electrical Engineering (ICEE), 2015 23rd Iranian Conference on, May 2015. [ bib ]
[14] R. Sameni and C. Gouy-Pailler, “An Iterative Subspace Denoising Algorithm for Removing Electroencephalogram Ocular Artifacts,” Journal of Neuroscience Methods, vol. 225, no. 3, pp. 97-105, March 2014. [ bib | DOI ]
[15] J. Behar, A. Wolfberg, T. Zhu, J. Oster, A. Niksch, D. Mah, T. Chun, J. Greenberg, C. Tanner, J. Harrop, A. V. Esbroeck, A. Alexander, M. McCarroll, T. Drake, A. Silber, R. Sameni, J. Ward, and G. Clifford, “Evaluation of the fetal QT interval using non-invasive fetal ECG technology,” in American Journal of Obstetrics and Gynecology, vol. 210, no. 1. New Orleans, LA: Society for Maternal-Fetal Medicine, February 2014, pp. S283-S284. [ bib ]
[16] M. Haghpanahi, R. Sameni, and D. A. Borkholder, “Scoring consensus of multiple ecg annotators by optimal sequence alignment,” in Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE. IEEE, 2014, pp. 1855-1859. [ bib ]
[17] --, The Open-Source Electrophysiological Toolbox (OSET), version 3.1, 2014. [Online]. Available: http://www.oset.irbib | http ]
[18] E. K. Roonizi and R. Sameni, “Morphological modeling of cardiac signals based on signal decomposition,” Computers in Biology and Medicine, vol. 43, no. 10, pp. 1453-1461, October 2013. [ bib | DOI ]
[19] M. Fatemi, M. Niknazar, and R. Sameni, “A Robust Framework for Noninvasive Extraction of Fetal Electrocardiogram Signals,” in Proceedings of the 40th Annual International Conference on Computersin Cardiology, Zaragoza, Spain, September 22-25 2013, pp. 201-204. [ bib ]
[20] F. Razavipour, M. Haghpanahi, and R. Sameni, “Fetal QRS Complex Detection using Semi-Blind Source Separation Framework,” in Proceedings of the 40th Annual International Conference on Computersin Cardiology, Zaragoza, Spain, September 22-25 2013, pp. 181-184. [ bib ]
[21] I. Silva, J. Behar, R. Sameni, T. Zhu, J. Oster, G. D. Clifford, and G. B. Moody, “Noninvasive Fetal ECG: the PhysioNet/Computing in Cardiology Challenge 2013,” in Proceedings of the 40th Annual International Conference on Computersin Cardiology, Zaragoza, Spain, September 22-25 2013, pp. 149-152. [ bib ]
[22] --, “Application of second and higher order subspace tracking in multichannel data analysis,” in Biomedical Engineering (ICBME), 2013 20th Iranian Conference on, Dec 2013, pp. 161-165. [ bib | DOI ]
[23] --, “A General Framework for Extracting Fetal Magnetoencephalogram and Audio-Evoked Responses,” Journal of Neuroscience Methods, vol. 212, no. 2, pp. 283-296, January 2013. [ bib | DOI ]
[24] B. Vahabzadeh and R. Sameni, “The Notion of Cardiac Phase and its Applications in Electrophysiological Studies,” in Biomedical Engineering (BioMed 2012), Innsbruck, Austria, February 15-17 2012. [ bib | DOI ]
[25] H. Hassani Saadi and R. Sameni, “Using matched filters for similarity search in genomic data,” in Proceedings of the 16th CSI International Symposium on Artificial Intelligence and Signal Processing (AISP), Shiraz, Iran, 2-3 May 2012 2012, pp. 469-472. [ bib ]
[26] --, “A Linear Kalman Notch Filter for Power-Line Interference Cancellation,” in Proceedings of the 16th CSI International Symposium on Artificial Intelligence and Signal Processing (AISP), Shiraz, Iran, 2-3 May 2012 2012, pp. 604-610. [ bib ]
[27] --, “An Iterative Subspace Denoising algorithm for Removing Electrocardiogram Ocular Artifact,” in Proc., l, 2012. [ bib ]
[28] L. Moraru, R. Sameni, U. Schneider, J. Haueisen, E. Schleußner, and D. Hoyer, “Validation of fetal auditory evoked cortical responses to enhance the assessment of early brain development using fetal MEG measurements,” Physiological Measurements, vol. 32, no. 11, pp. 1847-1868, October 2011. [ bib | DOI ]
[29] G. Clifford, R. Sameni, J. Ward, J. Robinson, and A. J. Wolfberg, “Clinically accurate fetal ECG parameters acquired from maternal abdominal sensors,” American Journal of Obstetrics and Gynecology, vol. 205, no. 1, pp. 47.e1-47.e5, July 2011. [ bib ]
[30] C. McDonnell, G. Clifford, R. Sameni, J. Ward, J. Robertson, and A. Wolfberg, “Comparison of abdominal sensors to a fetal scalp electrode for fetal ST analysis during labor,” in American Journal of Obstetrics and Gynecology, vol. 204, no. 1. Society for Maternal-Fetal Medicine, January 2011, pp. S256-S256. [ bib ]
[31] R. Sameni and G. D. Clifford, “A Review of Fetal ECG Signal Processing; Issues and Promising Directions,” The Open Pacing, Electrophysiology & Therapy Journal (TOPETJ), vol. 3, pp. 4-20, November 2010. [ bib | DOI ]
[32] L. Moraru, U. Schneider, R. Sameni, and D. Hoyer, “Identification of fetal auditory evoked responses from biomagnetic measurements,” in Proceedings of the 44th Annual Conference of the German Society of biomedical engineering, Rostock, Germany, October 2010. [ bib ]
[33] R. Sameni, C. Jutten, M. Shamsollahi, and G. Clifford, “Extraction of Fetal Cardiac Signals,” U.S. Patent US 2010/0137727 A1, June 3, 2010. [ bib ]
[34] G. Clifford, S. Nemati, and R. Sameni, “An Artificial Vector Model for Generating Abnormal Electrocardiographic Rhythms,” Physiological Measurements, vol. 31, no. 5, pp. 595-609, May 2010. [ bib ]
[35] --, “A Deflation Procedure for Subspace Decomposition,” IEEE Transactions on Signal Processing, vol. 58, no. 4, pp. 2363-2374, April 2010. [ bib ]
[36] --, The Open-Source Electrophysiological Toolbox (OSET), version 2.1, 2010. [Online]. Available: http://www.oset.irbib | http ]
[37] R. Sameni, C. Jutten, and M. B. Shamsollahi, “A deflation procedure for subspace decomposition,” Signal Processing, IEEE Transactions on, vol. 58, no. 4, pp. 2363-2374, 2010. [ bib ]
[38] G. D. Clifford, R. Sameni, J. Ward, J. Robertson, C. Pettigrew, and A. J. Wolfberg, “Comparing the fetal ST-segment acquired using a FSE and abdominal sensors,” in American Journal of Obstetrics and Gynecology, vol. 201, no. 6. Chicago, IL: Society for Maternal-Fetal Medicine, December 2009, pp. S242-S242. [ bib ]
[39] R. Sameni, G. D. Clifford, J. Ward, J. Robertson, C. Pettigrew, and A. J. Wolfberg, “Accuracy of fetal heart rate acquired from sensors on the maternal abdomen compared to a fetal scalp electrode,” in American Journal of Obstetrics and Gynecology, vol. 201, no. 6. Chicago, IL: Society for Maternal-Fetal Medicine, December 2009, pp. S241-S241. [ bib ]
[40] T. Tsalaile, R. Sameni, S. Sanei, C. Jutten, and J. Chambers, “Sequential Blind Source Extraction For Quasi-Periodic Signals With Time-Varying Period,” Biomedical Engineering, IEEE Transactions on, vol. 56, no. 3, pp. 646-655, March 2009. [ bib ]
[41] C. Gouy-Pailler, R. Sameni, M. Congedo, and C. Jutten, “Iterative Subspace Decomposition for Ocular Artifact Removal from EEG Recordings,” in Proc. of the 8th Intl. Conf. on Independent Component (ICA 2009), Paraty, Brazil, 2009, pp. 419-426. [ bib ]
[42] S. Kharabian, M. Shamsollahi, and R. Sameni, “Fetal R-wave detection from multichannel abdominal ECG recordings in low SNR,” in Proc. of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2009), Minneapolis, Minnesota, USA, Sep. 2009, pp. 344-347. [ bib | DOI ]
[43] --, “An Artificial Multi-Channel Model for Generating Abnormal Electrocardiographic Rhythms,” in Computers in Cardiology, 2008, Bologna, Italy, September 14-17 2008, pp. 773-776. [ bib ]
[44] L. Amini, R. Sameni, C. Jutten, G. Hossein-Zadeh, and H. Soltanian-Zadeh, “MR Artifact Reduction in the Simultaneous Acquisition of EEG and fMRI of Epileptic Patients,” in EUSIPCO2008 - 16th European Signal Processing Conf., Lausanne, Switzerland, August 25-29 2008. [ bib ]
[45] --, “Extraction of Fetal Cardiac Signals from an Array of Maternal Abdominal Recordings,” Ph.D. dissertation, Sharif University of Technology - Institut National Polytechnique de Grenoble, July 2008. [Online]. Available: http://www.sameni.info/Publications/Thesis/PhDThesis.pdfbib | .pdf ]
[46] R. Sameni, M. B. Shamsollahi, and C. Jutten, “Model-based Bayesian filtering of cardiac contaminants from biomedical recordings,” Physiological Measurement, vol. 29, no. 5, pp. 595-613, May 2008. [ bib | DOI ]
[47] M. Congedo, C. Jutten, R. Sameni, and C. Gouy-Pailler, “A new General Weighted Least-Squares Algorithm for Approximate Joint Diagonalization,” in Proceedings of the 4th International BCI Workshop, Graz, Austria, 2008. [ bib ]
[48] L. Moraru, R. Sameni, U. Schneider, C. Jutten, J. Haueisen, and D. Hoyer, “Identification of fetal auditory evoked cortical responses using a denoising method based on periodic component analysis,” in Proceedings of the 4th European Conference of the International Federation for Medical and Biological Engineering (ECIFMBE 2008), Antwerp, Belgium, 2008, pp. 1390-1393. [ bib ]
[49] --, Open-Source ECG Toolbox (OSET), 2008, 2nd version. [Online]. Available: http://ecg.sharif.ir/bib | http ]
[50] --, “Iterative Subspace Decomposition for Ocular Artifact Removal from EEG Recordings,” GIPSA-lab, INP-Grenoble, Tech. Rep., 2008. [ bib ]
[51] --, “Multichannel Electrocardiogram Decomposition using Periodic Component Analysis,” Biomedical Engineering, IEEE Transactions on, vol. 55, no. 8, pp. 1935-1940, Aug 2008. [ bib ]
[52] R. Sameni, M. B. Shamsollahi, C. Jutten, and G. D. Clifford, “A nonlinear bayesian filtering framework for ECG denoising,” Biomedical Engineering, IEEE Transactions on, vol. 54, no. 12, pp. 2172-2185, December 2007. [ bib ]
[53] --, “Multipole Expansion of Body Surface Potentials: An ICA Oriented Formulation (Part I),” November 2007, Technical Report. [ bib ]
[54] --, “Multipole Expansion of Body Surface Potentials: An ICA Oriented Formulation (Part I),” GIPSA-LAB, INP-Grenoble, Tech. Rep., November 2007, Technical Report. [ bib ]
[55] --, “A Kalman Notch Filter for Removing Power-Line Noise from Biomedical Signals,” GIPSA-LAB, INP-Grenoble, Tech. Rep., October 2007. [ bib ]
[56] --, “Removing ECG Contaminants from Multichannel Recordings by Deation,” September 2007, Technical Report. [ bib ]
[57] --, “Removing ECG Contaminants from Multichannel Recordings by Deflation,” GIPSA-LAB, INP-Grenoble, Tech. Rep., September 2007. [ bib ]
[58] --, “Primary Results on Multichannel Fetal ECG Recordings,” June 2007, Technical Report. [ bib ]
[59] --, “Primary Results on Multichannel Fetal ECG Recordings,” GIPSA-LAB, INP-Grenoble, Tech. Rep., June 2007, Technical Report. [ bib ]
[60] R. Sameni, G. D. Clifford, C. Jutten, and M. B. Shamsollahi, “Multichannel ECG and Noise Modeling: Application to Maternal and Fetal ECG Signals,” EURASIP Journal on Advances in Signal Processing, vol. 2007, pp. Article ID 43407, 14 pages, 2007, ISSN 1687-6172, doi:10.1155/2007/43407. [ bib ]
[61] O. Sayadi, R. Sameni, and M. Shamsollahi, “ECG Denoising Using Parameters of ECG Dynamical Model as the States of an Extended Kalman Filter,” in Engineering in Medicine and Biology Society, 2007. EMBS 2007. 29th Annual International Conference of the IEEE, Aug. 2007, pp. 2548-2551. [ bib | DOI ]
[62] --, “Model-Based Multichannel ECG Filtering,” December 2006, Technical Report. [ bib ]
[63] --, “Model-Based Multichannel ECG Filtering,” Sharif University of Technology, Tech. Rep., December 2006, Technical Report. [ bib ]
[64] --, “Primary Results on Multichannel Magnetocardiograms,” November 2006, Technical Report. [ bib ]
[65] --, “Primary Results on Multichannel Magnetocardiograms,” Sharif University of Technology, Tech. Rep., November 2006, Technical Report. [ bib ]
[66] C. Jutten, R. Sameni, and H. Hauksdóttir, “On the Relevance of Independent Components,” in Proc. of the ICA Research Network International Workshop (ICArn 2006), Liverpool, UK, September 18-19 2006, pp. 1-8. [ bib ]
[67] R. Sameni, M. Shamsollahi, and C. Jutten, “Multi-Channel Electrocardiogram Denoising Using a Bayesian Filtering Framework,” in Proc. of the 33rd Annual International Conference on Computers in Cardiology, Valencia, Spain, September 17-20 2006, pp. 185-188. [Online]. Available: http://cinc.mit.edu/archives/2006/bib | http ]
[68] --, “What ICA Provides for ECG Processing: Application to Noninvasive Fetal ECG Extraction,” in Proc. of the International Symposium on Signal Processing and Information Technology (ISSPIT'06), Vancouver, Canada, August 2006, pp. 656-661. [ bib ]
[69] R. Sameni, F. Vrins, F. Parmentier, C. Hérail, V. Vigneron, M. Verleysen, C. Jutten, and M. Shamsollahi, “Electrode Selection for Noninvasive Fetal Electrocardiogram Extraction using Mutual Information Criteria,” in Proc. of the 26th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering (MaxEnt 2006), vol. 872, CNRS, Paris, France, July 8-13 2006, pp. 97-104. [ bib ]
[70] --, “Removing ECG Artifacts from EEG Recordings,” May 2006, Technical Report. [ bib ]
[71] --, “Removing ECG Artifacts from EEG Recordings,” GIPSA-LAB, INP-Grenoble, Tech. Rep., May 2006, Technical Report. [ bib ]
[72] --, “Writing Efficient Matlab Codes,” Lecture Notes, Sharif University of Technology, Tech. Rep., 2006. [ bib ]
[73] --, Open Source ECG Toolbox (OSET), 2006. [Online]. Available: http://ecg.sharif.ir/bib | http ]
[74] E. Tavakoli, B. Vahdat, M. Shamsollahi, and R. Sameni, “Audio Watermarking for Covert Communication through Telephone System,” in IEEE International Symposium on Signal Processing and Information Technology, 2006, Aug. 2006, pp. 955-959. [ bib | DOI ]
[75] R. Sameni, M. B. Shamsollahi, C. Jutten, and M. Babaie-Zadeh, “Filtering Noisy ECG Signals Using the Extended Kalman Filter Based on a Modified Dynamic ECG Model,” in Proceedings of the 32nd Annual International Conference on Computers in Cardiology, Lyon, France, September 25-28 2005, pp. 1017-1020. [ bib ]
[76] --, “Filtering Electrocardiogram Signals Using the Extended Kalman Filter,” in Proceedings of the 27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS), Shanghai, China, September 1-4 2005, pp. 5639-5642. [ bib ]
[77] --, “Analysis of Iterative Approaches of Interpolation-Distortion Compensation,” March 2004, DSPII course term paper, Sharif University of Technology. [ bib ]
[78] --, “Analysis of Iterative Approaches of Interpolation-Distortion Compensation,” GIPSA-LAB, INP-Grenoble, Tech. Rep., March 2004, DSPII course term paper, Sharif University of Technology. [ bib ]
[79] R. Sameni, M. Shamsollahi, and L. Senhadji, “Processing Polysomnographic Signals, using Independent Component Analysis,” in Proc. Of the International Conference on Biomedical Engineering (BIOMED 2004), Innsbruck, Austria, February 2004, pp. 193-196. [ bib ]
[80] --, “Discrimination of EEG Patterns during the Performance of Different Mental Activities,” Research Project Report, Sharif University of Technology, Tech. Rep., 2004. [ bib ]
[81] R. Sameni and M. Shamsollahi, “Discrimination of EEG Signals during the Performance of Different Mental Tasks,” in Proc. of the World Congress on Medical Physics and Biomedical Engineering, Sydney, Australia, August 24-29 2003, [CD-ROM] ISBN 1877040142, Poster Paper No. 4251. [ bib ]
[82] --, “Discrimination of EEG Signals during the Performance of Different Mental Tasks,” Master's thesis, Sharif University of Technology, 2003. [ bib ]
[83] --, “Design and Implementation of a Portable Hotwire Anemometer,” IROST, Tech. Rep., November 2001. [ bib ]
[84] R. Sameni and S. Mansouri, “Designing a Training Board for the 8x51 Microcontroller Series,” September 2000, Bachlor's final project, Shiraz University. [ bib ]

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